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Scientific Program

黑料正能量Conference on Biofilms Scientific Program 

The 黑料正能量Biofilms Conference presents a dynamic scientific program exploring the latest advances in biofilm research. Join leading experts as they discuss cutting-edge discoveries, emerging challenges, and innovative applications in biofilm science, from medical and industrial settings to environmental impacts. Plan your time effectively to engage with the most relevant research and connect with presenters each day.

A scientific poster is presented at the 黑料正能量Conference on Biofilms.


Program Schedule

All sessions are in Pacific time

Note: The following schedule is a long-form comprehensive look at the meeting, including session times, speakers and topics. Continental breakfast will be provided on Nov. 10-13, and luncheon will be provided on Nov. 10, 11 and 13.

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Sunday, November 9

1-5 p.m.

Early Career Symposium

(Additional fee $ and advanced registration required)

6–7:15 p.m.
 

Opening General Session

  • 6–6:15 p.m. | Opening Remarks
    Clay Fuqua, Ph.D., Indiana University at Bloomington, Biofilms 2025 Program Committee Chair

  • 6:15–7:15 p.m. | The Many Faces of Biofilm Development in Pseudomonas Aeruginosa
    Keynote Speaker: Matthew Parsek, Ph.D., University of Washington
7:15–8:30 p.m.

Welcome Reception


Monday, November 10

7:45–8:15 a.m.

Continental Breakfast

8:15–10:05 a.m.

Scientific Session 1: Environmental Biofilms and Climate Change

Moderator: Birthe Veno Kjellerup, Ph.D., University of Maryland

  • 8:15–8:40 a.m. | Environmental Biofilms and Carbon Flux
    Invited Speaker: Christine Foreman, Ph.D., Montana State University

  • 8:40–9:40 a.m. | Oral Abstract Presentations

  • 9:40–10:05 a.m. | Microfluidic Investigation on the Role of Flow Dynamics, Surface Roughness and 
    Bacterial Motility on Biofilm Formation

    Invited Speaker: Judy Q. Yang, Ph.D., University of Minnesota
10:05–10:35 a.m.

Morning Break in Poster Hall

10:35 a.m.–12:25 p.m.

Scientific Session 2: Multispecies Biofilms and Microbiomes 

Moderator: Caitlin Light, Ph.D., Binghamton University

  • 10:35–11 a.m. | Creating a Quantitative Understanding of Local Interactions in Multispecies Biofilms
    Invited Speaker: Simon van Vliet, Ph.D., Biozentrum, University of Basel

  • 11 a.m.–12 p.m. | Oral Abstract Presentations

  • 12–12:25 p.m. | Ecological Management of the Gut Microbiome for Cancer Patients
    Invited Speaker: Joao Xavier, Ph.D., Memorial Sloan Kettering Cancer Center
12:25–12:40 p.m.

Lightning Talks

12:40–2:10 p.m.

Lunch & Learn Presentation: AJEDI Makes Better Microbiology

Invited Speaker: Jo Handelsman, Ph.D., University of Wisconsin-Madison

2:10–4:10 p.m.

Poster Session #1 with Refreshments

4:10–6 p.m.

Scientific Session 3: Attachment and Early Biofilm Formation

Moderator: Christophe Beloin, Ph.D., Institut Pasteur

  • 4:10–4:35 p.m. | Biofilm Cell Fates Revealed Using Far-Red Fluorogenic Probes
    Invited Speaker: Andrew Bridges, Ph.D., Carnegie-Mellon

  • 4:35–5:35 p.m. | Oral Abstract Presentations

  • 5:35–6 p.m. | Helicobacter Pylori Uses Its Flagella in Multiple Ways to Control Biofilm Formation
    Invited Speaker: Karen Ottemann, Ph.D., UC Santa Cruz
8–9 p.m.

Networking Event

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Tuesday, November 11

7:45–8:15 a.m.

Continental Breakfast

8:15–10:05 a.m.
 

Scientific Session 4: Structures and Processes in Maturing Biofilms

Moderator: Boo Shan Tseng, Ph.D., University of Nevada

  • 8:15–9:40 a.m. | Role for the Symbiosis Polysaccharide in Vibrio fischeri Biofilm Formation (J. William Costerton Lecture)
    Invited Speaker: Karen Visick, Ph.D., Loyola Stritch School of Medicine

  • 9:40–10:40 a.m. | Oral Abstract Presentations

  • 10:40–10:05 a.m. | Large-Scale Extracellular Matrix Architecture and 3D Biofilm Physiology as Interconnected 
    Emerging Properties of Bacterial Multicellularity

    Invited Speaker: Regine Hengge, Ph.D., Humboldt-Universit盲t zu Berlin
10:05–10:35 a.m.

Morning Break in Poster Hall

10:35–12:25 p.m.

Scientific Session 5: Metabolic and Physiological Biofilm Properties

Moderator: Maria Hadjifrangiskou, Ph.D., Vanderbilt University

  • 10:35–11 a.m. | Metabolic Heterogeneity in Pseudomonas Aeruginosa Biofilms
    Invited Speaker: Lars Dietrich, Ph.D., Columbia University

  • 11 a.m.–12 p.m. | Oral Abstract Presentations

  • 12–12:25 p.m. | Spatial Heterogeneity and Resistance of Bacterial Biofilms
    Invited Speaker: Jintao Liu, Ph.D., Tsinghua University
12:25–12:40 p.m.

Lightning Talks

12:40–2:10 p.m.

Lunch & Learn Presentation: Early Career Round Table Discussions

2:10–4:10 p.m.

Poster Session #2 with Refreshments

4:10–6 p.m.

Scientific Session 6: Mechanisms of Biofilm Dispersal

Moderator: Caitlin Light, Ph.D., Binghamton University

  • 4:10–4:35 p.m. | Cyclic di-GMP Signaling in Vibrio cholerae
    Invited Speaker: Christopher Waters, Ph.D., Michigan State University

  • 4:35–5:35 p.m. | Oral Abstract Presentations

  • 5:35–6 p.m. | Outer Membrane Vesicles as Players in Biofilm Development and Matrix Dynamics
    Invited Speaker: Jeffrey Schertzer, Ph.D., Binghamton University

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Wednesday, November 12

7:45–8:15 a.m. 

Continental Breakfast

8:15–10:05 a.m.
 

Scientific Session 7: Social and Asocial Interactions in Biofilms

Moderator: Mette Burm酶lle, Ph.D., University of Copenhagen

  • 8:15–8:40 a.m. | Moving Biofilms: Collective Movement in THOR, a Model Microbial Community
    Invited Speaker: Jo Handelsman, Ph.D., University of Wisconsin-Madison

  • 8:40–9:40 a.m. | Oral Abstract Presentations

  • 9:40–10:05 a.m. | From Molecular Genetics to Phylogenomics: A Journey Across the Determinants of Biofilm Formation in Klebsiella pneumoniae
    Invited Speaker: Olaya Rendueles Garc铆a, Ph.D., Center for Integrative Biology Toulouse
10:05–10:35 a.m.

Morning Break in Poster Hall

10:35 a.m.–12:25 p.m.

Scientific Session 8: Biofilms on Host Organisms

Moderator: Megan O’Malley, Ph.D., University of Washington

  • 10:35–11 a.m. | Immune Dynamics During Biofilm Coinfection
    Invited Speaker: Daniel Wozniak, Ph.D., Ohio State University

  • 11 a.m.–12 p.m. | Oral Abstract Presentations

  • 12–12:25 p.m. | Plant Root Microbiota Biofilms in Protection Against Pathogens
    Invited Speaker: Cara Haney, Ph.D., University of Pittsburgh
12:25–12:40 p.m.

Lightning Talks

12:40–2:10 p.m.

Lunch On Your Own

2:10–4:10 p.m.

Poster Session #3 with Refreshments

4:30–7:30 p.m.

Paul Stoodley Biofilm Image Analysis Workshop 

(Additional fee $ and advanced registration required)

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Thursday, November 13

7:45–8:15 a.m. Continental Breakfast
8:15–10:05 a.m.
 

Scientific Session 9: Antimicrobial Therapies and Biofilms

Moderator: Kendra Rumbaugh, Ph.D., Texas Tech University

  • 8:15–8:40 a.m. | Targeted Drug Delivery for Biofilm Infections
    Invited Speaker: Rikke Louise Meyer, Ph.D., Aarhus University

  • 8:40–9:40 a.m. | Oral Abstract Presentations
     
  • 9:40–10:05 a.m. | Why Evolution in Biofilms is Different, with Important Consequences for Antimicrobial Treatment
    Invited Speaker: Vaughn Cooper, Ph.D., University of Pittsburgh
10:05–10:35 a.m.

Morning Break in Poster Hall

10:35 a.m.–12:25 p.m.

Scientific Session 10: Biofilm Control and Engineering 

Moderator: Ehud Banin, Ph.D., Bar-Ilan University

  • 10:35–11鈥痑.m. | Modulating Host Immunity to Combat Staphylococcus aureus Biofilm Infection 
    Invited Speaker: Tammy Kielian, Ph.D., University of Nebraska Medical Center 

  • 11a.m.–12 p.m. | Oral Abstract Presentations

  • 12–12:25鈥痯.m. | Using Smart Biomaterials to Combat Biofilms 
    Invited Speaker: Anita Shukla, Ph.D., Brown University
12:25 –12:40 p.m.

Lightning Talks

12:40 –2:10 p.m.

Lunch & Learn Presentation 

Invited Speaker: Caitlin Light, Ph.D., Binghamton University

2:10–4:10 p.m.

Poster Session #4 with Refreshments

4:10–6 p.m. 

Scientific Session 11: History and New Approaches in Biofilm Research

Moderator: Dean Rowe-Magnus, Ph.D., Indiana University at Bloomington

  • 4:10–4:35鈥痯.m. | The Story of Slime 
    Invited Speaker: Hans-Curt Flemming, Ph.D., Singapore Center for Life Science and Engineering

  • 4:35–5:35 p.m. | Oral Abstract Presentations

  • 5:35–6鈥痯.m. | High-Throughput Biofilm Assaying Using Drop-Based Microfluidics 
    Invited Speaker: Connie Chang, Ph.D., Mayo Clinic
6–7:15 p.m.

Closing Keynote Session

  • 6–7p.m. | Location Matters in Host-Microbe Symbioses
    Keynote Speaker: Nicole Dubilier, Ph.D., Max Planck Institute

  • 7–7:15鈥痯.m. | Closing Remarks 
    Speaker: Karin Sauer, Ph.D., Binghamton University, Biofilms 2025 Program Committee Chair

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Pre-Conferences and Workshops

Mark Shirtliff Early Career Symposium

(Additional Fee $)

Sunday, Nov. 9, 1-5 p.m. PT

Description: Kickstart your 黑料正能量Conference on Biofilms 2025 experience with the Mark Shirtliff Early Career Symposium (ECS), a unique opportunity designed specifically for trainees by trainees. Taking place just before the main conference, this symposium offers an informal and supportive environment where early-career scientists can share their research, connect with peers and gain valuable insights from 2 inspiring faculty speakers.

Organized by graduate students and postdocs, the ECS is tailored to address the needs and aspirations of the next generation of biofilm researchers. With opportunities to present your work, network with like-minded professionals and gain career-building advice, this program is not to be missed.

  • 1-1:30 p.m.  | Building Sustainable Polymicrobial Biofilms, Scientists and Laboratories
    Invited Speaker: Dominique (Nicki) Limoli, Ph.D., Indiana University

  • 1:30-2:45 p.m.  | Oral Abstract Presentations

  • 2:45-3:15 p.m.  | Break
  • 3:15-4:15 p.m. | Oral Abstract Presentations

  • 4:15-4:45 p.m. | G-quadruplexes and Extracellular RNA Co-Exist in Pseudomonas Biofilm Matrices
    Invited Speaker: Thomas Seviour, Ph.D., Aarhus University

Paul Stoodley Biofilm Image Analysis Workshop

(Additional Fee $)

Wednesday, Nov. 12, 4:30-7:30 p.m. PT

Description: Elevate your biofilm research with advanced microscopy and image analysis techniques at the Paul Stoodley Biofilm Image Analysis Workshop. This optional hands-on session, held during the afternoon and early evening of Wednesday, Nov. 12, 2025, in Portland, Ore., at the 黑料正能量Conference on Biofilms, is designed for researchers aiming to enhance the quantifiability and statistical rigor of their biofilm imaging.

Led by experts in biofilm image analysis, the workshop will cover essential concepts and practical applications of analyzing multichannel 3D (XYZ) and 4D (XYZT) confocal data sets. The workshop will include an overview of COMSTAT, BiofilmQ, MiPACT workflow and biofilm-aggregate analysis using IMARIS. Attendees will gain direct experience using powerful, freely available tools like COMSTAT and BiofilmQ. Step-by-step guidance will be provided, and participants will have access to example data sets or may analyze their own.

To participate, bring a laptop capable of running MATLAB-based software; detailed instructions for downloading and installing the necessary programs will be shared in advance. Don’t miss this opportunity to refine your skills and apply cutting-edge image analysis techniques to your biofilm research!

  • 4:30-4:50 p.m.  | MiPACT
    Workshop Leader: William DePas, Ph.D., University of Pittsburgh.

  • 4:50-5:10 p.m.  | Biofilm-Aggregate Analysis
    Workshop Leader: Sophie Darch, Ph.D., University of South Florida.

  • 5:10-5:30 p.m.  | COMSTAT Demonstration
    Workshop Leader: Erin Gloag, Ph.D., Virginia Tech.
  • 5:30-5:50 p.m. | BiofilmQ Demonstration
    Workshop Leader: Hannah Jeckel, Ph.D., California Institute of Technology.

  • 5:50-6:30 p.m. | Independent Work Time
    Participants work independently on either provided or their own data sets. Experienced users of COMSTAT and BiofilmQ will be available for assistance.  

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Program Committee

Clay Fuqua, Ph.D. 
Co-Chair 
Indiana University at Bloomington 
Bloomington, Ind. 

Karin Sauer, Ph.D. 
Co-Chair 
Binghamton University 
Binghamton, N.Y. 

Ehud Banin, Ph.D. 
Bar-Ilan University 
Ramat Gan, Israel 

Christophe Beloin, Ph.D. 
Institut Pasteur 
Paris, France

Mette Burm酶lle, Ph.D. 
University of Copenhagen 
Copenhagen, Denmark 

Maria Hadjifrangiskou, Ph.D. 
Vanderbilt University 
Nashville, Tenn. 

Birthe Kjellerup, Ph.D.
University of Maryland 
College Park, Md.

Dean Rowe-Magnus, Ph.D. 
Indiana University at Bloomington
Bloomington, Ind.

Kendra Rumbaugh, Ph.D.
Texas Tech University Health Sciences Center
Lubbock, Tex.

Mark Schembri, Ph.D.
University of Queensland
Brisbane, Australia 

Boo Shan Tseng, Ph.D.
University of Nevada
Las Vegas, Nev.

Early Career Committee

Caitlin Light, Ph.D. 
Co-Chair
Binghamton University 
Binghamton, N.Y. 

Megan O'Malley, Ph.D. 
Co-Chair 
University of Washington 
Seattle, Wash.

Nasibeh Arabameri 
University of Nevada Las-Vegas 
Las Vegas, Nev.

Lauren Augusta 
Indiana University Bloomington 
Bloomington, Ind.

Sarah Comer 
Vanderbilt University 
Nashville, Tenn. 

Angus Johnson
Dartmouth College
Hanover, Nh. 

Amir Riyahi, M.Sc.
University of Maryland 
College Park, Md. 

Heema Vyas, Ph.D.
University of Adelaide
Adelaide, Australia

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